Source: GWASDB

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs9276440
rs9276440
HLA-DQA2
0.925 0.120 6 32747006 3 prime UTR variant A/G;T snv
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.700 1.000 1 2007 2007
dbSNP: rs9276440
rs9276440
HLA-DQA2
0.925 0.120 6 32747006 3 prime UTR variant A/G;T snv
CUI: C0027404
Disease: Narcolepsy
Narcolepsy 		0.700 1.000 1 2009 2009
dbSNP: rs2071800
rs2071800
HLA-DQA2
1.000 0.120 6 32746366 missense variant G/A snv 6.1E-02 5.5E-02
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 2 2007 2011
dbSNP: rs9276435
rs9276435
HLA-DQA2
1.000 0.120 6 32746090 intron variant C/A;T snv 0.13
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2011 2011
dbSNP: rs2239800
rs2239800
HLA-DQA2
0.882 0.280 6 32745490 intron variant A/G snv 0.11
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2009 2009
dbSNP: rs2239800
rs2239800
HLA-DQA2
0.882 0.280 6 32745490 intron variant A/G snv 0.11
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.700 1.000 1 2007 2007
dbSNP: rs2239800
rs2239800
HLA-DQA2
0.882 0.280 6 32745490 intron variant A/G snv 0.11
CUI: C0027404
Disease: Narcolepsy
Narcolepsy 		0.700 1.000 1 2009 2009
dbSNP: rs2213565
rs2213565
HLA-DQA2
1.000 0.080 6 32745411 splice region variant C/T snv 0.81 0.80
CUI: C0019163
Disease: Hepatitis B
Hepatitis B 		0.700 1.000 1 2013 2013
dbSNP: rs9276432
rs9276432
HLA-DQA2
1.000 0.080 6 32744607 intron variant T/A;C snv
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.700 1.000 1 2007 2007
dbSNP: rs9276431
rs9276431
HLA-DQA2
1.000 0.080 6 32744470 intron variant T/A;C snv
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.700 1.000 1 2007 2007
dbSNP: rs9276429
rs9276429
HLA-DQA2
1.000 0.080 6 32744327 intron variant G/A snv 0.63
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.700 1.000 1 2007 2007
dbSNP: rs9276427
rs9276427
HLA-DQA2
0.925 0.120 6 32744080 intron variant T/C snv 0.57
CUI: C0019163
Disease: Hepatitis B
Hepatitis B 		0.700 1.000 1 2013 2013
dbSNP: rs2227127
rs2227127
HLA-DQA2
0.925 0.120 6 32744005 intron variant A/G snv 0.37
CUI: C0026769
Disease: Multiple Sclerosis
Multiple Sclerosis 		0.700 1.000 1 2007 2007
dbSNP: rs2227127
rs2227127
HLA-DQA2
0.925 0.120 6 32744005 intron variant A/G snv 0.37
CUI: C0027404
Disease: Narcolepsy
Narcolepsy 		0.700 1.000 1 2009 2009
dbSNP: rs17500468
rs17500468
HLA-DQA2
1.000 0.120 6 32743401 intron variant A/G snv 9.8E-02
CUI: C0011854
Disease: Diabetes Mellitus, Insulin-Dependent
Diabetes Mellitus, Insulin-Dependent 		0.700 1.000 1 2007 2007
dbSNP: rs9276425
rs9276425
HLA-DQA2
1.000 0.120 6 32743273 intron variant C/T snv 0.19
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2011 2011
dbSNP: rs9276408
rs9276408
HLA-DQA2
1.000 0.120 6 32742593 intron variant T/G snv 0.66
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2011 2011
dbSNP: rs5018343
rs5018343
HLA-DQA2
1.000 0.120 6 32742342 intron variant A/T snv 0.69
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2011 2011
dbSNP: rs4403295
rs4403295
HLA-DQA2
1.000 0.120 6 32742233 intron variant G/A;T snv
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2011 2011
dbSNP: rs2051598
rs2051598
HLA-DQA2
1.000 0.080 6 32741586 intron variant G/A snv 0.71
CUI: C0019163
Disease: Hepatitis B
Hepatitis B 		0.700 1.000 1 2013 2013
dbSNP: rs2051600
rs2051600
HLA-DQA2
1.000 0.120 6 32741532 splice region variant A/G snv 0.81 0.81
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2011 2011
dbSNP: rs9276396
rs9276396
HLA-DQA2
1.000 0.080 6 32740959 upstream gene variant T/C snv 0.80
CUI: C0019163
Disease: Hepatitis B
Hepatitis B 		0.700 1.000 1 2013 2013
dbSNP: rs9276395
rs9276395
HLA-DQA2
0.925 0.200 6 32740727 upstream gene variant C/A;G snv
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2011 2011
dbSNP: rs9276395
rs9276395
HLA-DQA2
0.925 0.200 6 32740727 upstream gene variant C/A;G snv
CUI: C0019163
Disease: Hepatitis B
Hepatitis B 		0.700 1.000 1 2013 2013
dbSNP: rs9276394
rs9276394
HLA-DQA2
0.925 0.200 6 32740690 upstream gene variant T/A snv 0.80
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2011 2011